Norwegian High Throughput DNA Sequencing Centre (NSC).
- Prosjektnummer
- 2010120
- Ansvarlig person
- Dag Undlien
- Institusjon
- Oslo universitetssykehus HF
- Prosjektkategori
- Regional teknologisk kjernefasilitet
- Helsekategori
- Generic Health Relevance
- Forskningsaktivitet
- 2. Aetiology
Fungal palaeodiversity revealed using high-throughput metabarcoding of ancient DNA from arctic permafrost.
Environ Microbiol 2012 Oct. Epub 2012 okt 11
PMID: 23171292
Blocking human contaminant DNA during PCR allows amplification of rare mammal species from sedimentary ancient DNA.
Mol Ecol 2012 Apr;21(8):1806-15. Epub 2011 okt 12
PMID: 21988749
Radiolaria associated with large diversity of marine alveolates.
Protist 2012 Sep;163(5):767-77. Epub 2012 mai 31
PMID: 22658831
New environmental metabarcodes for analysing soil DNA: potential for studying past and present ecosystems.
Mol Ecol 2012 Apr;21(8):1821-33.
PMID: 22486821
Genome fragmentation is not confined to the peridinin plastid in dinoflagellates.
PLoS One 2012;7(6):e38809. Epub 2012 jun 18
PMID: 22719952
Differential expression of miRNAs in colorectal cancer: comparison of paired tumor tissue and adjacent normal mucosa using high-throughput sequencing.
PLoS One 2012;7(4):e34150. Epub 2012 apr 17
PMID: 22529906
Metagenomic and geochemical characterization of pockmarked sediments overlaying the Troll petroleum reservoir in the North Sea.
BMC Microbiol 2012;12():203. Epub 2012 sep 11
PMID: 22966776
Microbial diversity of Loki's Castle black smokers at the Arctic Mid-Ocean Ridge.
Geobiology 2012 Nov;10(6):548-61. Epub 2012 sep 25
PMID: 23006788
High consistency between replicate 454 pyrosequencing analyses of ectomycorrhizal plant root samples.
Mycorrhiza 2012 May;22(4):309-15. Epub 2011 jul 16
PMID: 21779811
ALKBH1 is a histone H2A dioxygenase involved in neural differentiation.
Stem Cells 2012 Dec;30(12):2672-82.
PMID: 22961808
Metatranscriptomics of the marine sponge Geodia barretti: tackling phylogeny and function of its microbial community.
Environ Microbiol 2012 May;14(5):1308-24. Epub 2012 feb 24
PMID: 22364353
Alterations of microbiota in urine from women with interstitial cystitis.
BMC Microbiol 2012;12():205. Epub 2012 sep 13
PMID: 22974186
Severe ALG8-CDG (CDG-Ih) associated with homozygosity for two novel missense mutations detected by exome sequencing of candidate genes.
Eur J Med Genet 2012 Mar;55(3):196-202. Epub 2012 jan 16
PMID: 22306853
miR-511-3p modulates genetic programs of tumor-associated macrophages.
Cell Rep 2012 Feb;1(2):141-54. Epub 2012 feb 9
PMID: 22832163
Fine-Scale Community Structure Analysis of ANME in Nyegga Sediments with High and Low Methane Flux.
Front Microbiol 2012;3():216. Epub 2012 jun 15
PMID: 22715336
Genome sequence of the bacteriocin-producing strain Lactococcus garvieae DCC43.
J Bacteriol 2012 Dec;194(24):6976-7.
PMID: 23209230
Detection and characterisation of SCCmec remnants in multiresistant methicillin-susceptible Staphylococcus aureus causing a clonal outbreak in a Swedish county.
Eur J Clin Microbiol Infect Dis 2012 Feb;31(2):141-7. Epub 2011 mai 18
PMID: 21590357
Pull-down of 5-hydroxymethylcytosine DNA using JBP1-coated magnetic beads.
Nat Protoc 2012 Feb;7(2):340-50. Epub 2012 jan 26
PMID: 22281869
[Individual genome sequencing].
Tidsskr Nor Laegeforen 2012 Feb;132(3):264.
PMID: 22314723
A mild form of Mucopolysaccharidosis IIIB diagnosed with targeted next-generation sequencing of linked genomic regions.
Eur J Hum Genet 2012 Jan;20(1):58-63. Epub 2011 jun 29
PMID: 21712855
Collodictyon--an ancient lineage in the tree of eukaryotes.
Mol Biol Evol 2012 Jun;29(6):1557-68. Epub 2012 jan 6
PMID: 22319147
Bacterial diversity in relation to secondary production and succession on surfaces of the kelp Laminaria hyperborea.
ISME J 2012 Dec;6(12):2188-98. Epub 2012 jul 5
PMID: 22763650
Integrated metagenomic and metaproteomic analyses of an ANME-1-dominated community in marine cold seep sediments.
Environ Microbiol 2012 May;14(5):1333-46. Epub 2012 mar 9
PMID: 22404914
Whole genome sequencing of the fish pathogen Francisella noatunensis subsp. orientalis Toba04 gives novel insights into Francisella evolution and pathogenecity.
BMC Genomics 2012;13():598. Epub 2012 nov 6
PMID: 23131096
Limitations and possibilities of low cell number ChIP-seq.
BMC Genomics 2012;13():645. Epub 2012 nov 21
PMID: 23171294
Seasonal trends in the biomass and structure of bryophyte-associated fungal communities explored by 454 pyrosequencing.
New Phytol 2012 Sep;195(4):844-56. Epub 2012 jul 3
PMID: 22758207
Correlating microbial community profiles with geochemical data in highly stratified sediments from the Arctic Mid-Ocean Ridge.
Proc Natl Acad Sci U S A 2012 Oct;109(42):E2846-55. Epub 2012 okt 1
PMID: 23027979
Diagnosis by sequencing: correction of misdiagnosis from FSHD2 to LGMD2A by whole-exome analysis.
Eur J Hum Genet 2012 Sep;20(9):999-1003. Epub 2012 feb 29
PMID: 22378277
Alkbh1 and Tzfp repress a non-repeat piRNA cluster in pachytene spermatocytes.
Nucleic Acids Res 2012 Nov;40(21):10950-63. Epub 2012 sep 10
PMID: 22965116
Barcoded primers used in multiplex amplicon pyrosequencing bias amplification.
Appl Environ Microbiol 2011 Nov;77(21):7846-9. Epub 2011 sep 2
PMID: 21890669
Genome evolution of a tertiary dinoflagellate plastid.
PLoS One 2011;6(4):e19132. Epub 2011 apr 26
PMID: 21541332
Identification and gene expression analysis of three GnRH genes in female Atlantic cod during puberty provides insight into GnRH variant gene loss in fish.
Gen Comp Endocrinol 2011 Jul;172(3):458-67. Epub 2011 apr 20
PMID: 21521645
Exploring the composition and diversity of microbial communities at the Jan Mayen hydrothermal vent field using RNA and DNA.
FEMS Microbiol Ecol 2011 Sep;77(3):577-89. Epub 2011 jul 4
PMID: 21627670
New insight into stratification of anaerobic methanotrophs in cold seep sediments.
FEMS Microbiol Ecol 2011 Nov;78(2):233-43. Epub 2011 jul 14
PMID: 21676010
The genome sequence of Atlantic cod reveals a unique immune system.
Nature 2011 Sep;477(7363):207-10. Epub 2011 aug 10
PMID: 21832995
Discovery of nuclear-encoded genes for the neurotoxin saxitoxin in dinoflagellates.
PLoS One 2011;6(5):e20096. Epub 2011 mai 18
PMID: 21625593
Assessing diversity of the female urine microbiota by high throughput sequencing of 16S rDNA amplicons.
BMC Microbiol 2011;11():244. Epub 2011 nov 2
PMID: 22047020
A metagenomic study of methanotrophic microorganisms in Coal Oil Point seep sediments.
BMC Microbiol 2011;11():221. Epub 2011 okt 4
PMID: 21970369
En ny æra for DNA sekvensering. Nye muligheter og nye utfordringer i humanmedisin.
Genialt 1/2010 s 16-18
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